| nexusLIMS/__init__.py |
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build_acq_activities |
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edit |
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labarchives_get_uid |
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load |
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| nexusLIMS/cli/migrate.py |
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| nexusLIMS/cli/migrate.py |
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main |
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12 |
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| nexusLIMS/cli/process_records.py |
main |
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| nexusLIMS/cli/process_records.py |
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| nexusLIMS/config.py |
NemoHarvesterConfig.validate_trailing_slash |
6 |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
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30 |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
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| nexusLIMS/config.py |
clear_settings |
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| nexusLIMS/config.py |
read_labarchives_env |
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0 |
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| nexusLIMS/config.py |
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0 |
19 |
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| nexusLIMS/db/__init__.py |
(no function) |
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0 |
0 |
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| nexusLIMS/db/engine.py |
get_engine |
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| nexusLIMS/db/engine.py |
(no function) |
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2 |
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(no function) |
19 |
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0 |
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| nexusLIMS/db/migrations/__init__.py |
(no function) |
0 |
0 |
0 |
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| nexusLIMS/db/migrations/env.py |
_generate_revision_id |
15 |
0 |
2 |
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| nexusLIMS/db/migrations/env.py |
process_revision_directives |
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0 |
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run_migrations_offline |
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0 |
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run_migrations_online |
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(no function) |
21 |
0 |
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| nexusLIMS/db/migrations/utils.py |
create_backup |
6 |
0 |
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| nexusLIMS/db/migrations/utils.py |
verify_table_integrity |
18 |
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| nexusLIMS/db/migrations/utils.py |
(no function) |
6 |
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| nexusLIMS/db/migrations/versions/__init__.py |
(no function) |
0 |
0 |
0 |
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| nexusLIMS/db/migrations/versions/v1_4_3_initial_schema_baseline.py |
upgrade |
3 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v1_4_3_initial_schema_baseline.py |
downgrade |
3 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v1_4_3_initial_schema_baseline.py |
(no function) |
9 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_4_0a_add_upload_log_table.py |
upgrade |
3 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_4_0a_add_upload_log_table.py |
downgrade |
3 |
0 |
0 |
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| nexusLIMS/db/migrations/versions/v2_4_0a_add_upload_log_table.py |
(no function) |
9 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_4_0b_add_check_constraints.py |
upgrade |
29 |
0 |
1 |
100% |
| nexusLIMS/db/migrations/versions/v2_4_0b_add_check_constraints.py |
downgrade |
29 |
0 |
1 |
100% |
| nexusLIMS/db/migrations/versions/v2_4_0b_add_check_constraints.py |
(no function) |
10 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_5_0a_add_external_user_identifiers.py |
upgrade |
3 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_5_0a_add_external_user_identifiers.py |
downgrade |
3 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_5_0a_add_external_user_identifiers.py |
(no function) |
9 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_5_0b_remove_computer_fields.py |
upgrade |
7 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_5_0b_remove_computer_fields.py |
downgrade |
7 |
0 |
0 |
100% |
| nexusLIMS/db/migrations/versions/v2_5_0b_remove_computer_fields.py |
(no function) |
9 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
TZDateTime.process_bind_param |
5 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
TZDateTime.process_result_value |
5 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.name |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.timezone |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.__repr__ |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.__str__ |
1 |
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0 |
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| nexusLIMS/db/models.py |
Instrument.localize_datetime |
7 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.localize_datetime_str |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.to_dict |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
Instrument.to_json |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
SessionLog.__repr__ |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
SessionLog.insert_log |
9 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
UploadLog.__repr__ |
2 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
ExternalUserIdentifier.__repr__ |
1 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
get_external_id |
3 |
0 |
1 |
100% |
| nexusLIMS/db/models.py |
get_nexuslims_username |
3 |
0 |
0 |
100% |
| nexusLIMS/db/models.py |
store_external_id |
15 |
0 |
1 |
100% |
| nexusLIMS/db/models.py |
get_all_external_ids |
3 |
0 |
1 |
100% |
| nexusLIMS/db/models.py |
(no function) |
80 |
0 |
1 |
100% |
| nexusLIMS/db/session_handler.py |
Session.__init__ |
4 |
0 |
0 |
100% |
| nexusLIMS/db/session_handler.py |
Session.__repr__ |
1 |
0 |
0 |
100% |
| nexusLIMS/db/session_handler.py |
Session.update_session_status |
7 |
0 |
0 |
100% |
| nexusLIMS/db/session_handler.py |
Session.insert_record_generation_event |
8 |
0 |
0 |
100% |
| nexusLIMS/db/session_handler.py |
get_sessions_to_build |
16 |
0 |
0 |
100% |
| nexusLIMS/db/session_handler.py |
get_all_session_logs |
5 |
0 |
0 |
100% |
| nexusLIMS/db/session_handler.py |
(no function) |
18 |
0 |
0 |
100% |
| nexusLIMS/exporters/__init__.py |
export_records |
21 |
0 |
0 |
100% |
| nexusLIMS/exporters/__init__.py |
_log_to_database |
5 |
0 |
0 |
100% |
| nexusLIMS/exporters/__init__.py |
was_successfully_exported |
3 |
0 |
0 |
100% |
| nexusLIMS/exporters/__init__.py |
(no function) |
15 |
0 |
6 |
100% |
| nexusLIMS/exporters/base.py |
ExportResult.__repr__ |
2 |
0 |
0 |
100% |
| nexusLIMS/exporters/base.py |
ExportContext.get_result |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/base.py |
ExportContext.add_result |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/base.py |
ExportContext.has_successful_export |
2 |
0 |
0 |
100% |
| nexusLIMS/exporters/base.py |
ExportDestination.enabled |
0 |
0 |
1 |
100% |
| nexusLIMS/exporters/base.py |
ExportDestination.validate_config |
0 |
0 |
1 |
100% |
| nexusLIMS/exporters/base.py |
ExportDestination.export |
0 |
0 |
1 |
100% |
| nexusLIMS/exporters/base.py |
(no function) |
38 |
0 |
4 |
100% |
| nexusLIMS/exporters/destinations/__init__.py |
(no function) |
0 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
CDCSDestination.enabled |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
CDCSDestination.validate_config |
15 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
CDCSDestination.export |
9 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
CDCSDestination._upload_to_cdcs |
12 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
CDCSDestination._get_template_id |
6 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
CDCSDestination._get_workspace_id |
7 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/cdcs.py |
(no function) |
19 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination.enabled |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination.validate_config |
12 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination.export |
15 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination._build_title |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination._build_html_body |
9 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination._build_tags |
4 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination._build_metadata |
10 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
ELabFTWDestination._validate_extra_field |
18 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/elabftw.py |
(no function) |
33 |
0 |
6 |
100% |
| nexusLIMS/exporters/destinations/labarchives.py |
LabArchivesDestination.enabled |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/labarchives.py |
LabArchivesDestination.validate_config |
3 |
0 |
14 |
100% |
| nexusLIMS/exporters/destinations/labarchives.py |
LabArchivesDestination.export |
16 |
0 |
0 |
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| nexusLIMS/exporters/destinations/labarchives.py |
LabArchivesDestination._find_or_create_page |
17 |
0 |
0 |
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| nexusLIMS/exporters/destinations/labarchives.py |
LabArchivesDestination._collect_previews |
16 |
0 |
0 |
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| nexusLIMS/exporters/destinations/labarchives.py |
LabArchivesDestination._build_html_summary |
35 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/labarchives.py |
_find_node_by_text |
4 |
0 |
0 |
100% |
| nexusLIMS/exporters/destinations/labarchives.py |
_build_entry_url |
5 |
0 |
0 |
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| nexusLIMS/exporters/destinations/labarchives.py |
(no function) |
25 |
0 |
0 |
100% |
| nexusLIMS/exporters/registry.py |
ExporterRegistry.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/exporters/registry.py |
ExporterRegistry.discover_plugins |
17 |
0 |
1 |
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| nexusLIMS/exporters/registry.py |
ExporterRegistry._register_from_module |
10 |
0 |
0 |
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| nexusLIMS/exporters/registry.py |
ExporterRegistry._matches_protocol |
7 |
0 |
0 |
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| nexusLIMS/exporters/registry.py |
ExporterRegistry.get_enabled_destinations |
3 |
0 |
0 |
100% |
| nexusLIMS/exporters/registry.py |
ExporterRegistry.export_to_all |
1 |
0 |
0 |
100% |
| nexusLIMS/exporters/registry.py |
get_registry |
3 |
0 |
0 |
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| nexusLIMS/exporters/registry.py |
(no function) |
19 |
0 |
2 |
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| nexusLIMS/exporters/strategies.py |
execute_strategy |
8 |
0 |
0 |
100% |
| nexusLIMS/exporters/strategies.py |
_strategy_all |
13 |
0 |
1 |
100% |
| nexusLIMS/exporters/strategies.py |
_strategy_first_success |
12 |
0 |
1 |
100% |
| nexusLIMS/exporters/strategies.py |
_strategy_best_effort |
13 |
0 |
1 |
100% |
| nexusLIMS/exporters/strategies.py |
(no function) |
8 |
0 |
3 |
100% |
| nexusLIMS/extractors/__init__.py |
_config_available |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/__init__.py |
_add_extraction_details |
10 |
0 |
3 |
100% |
| nexusLIMS/extractors/__init__.py |
get_schema_for_dataset_type |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/__init__.py |
validate_nx_meta |
12 |
0 |
1 |
100% |
| nexusLIMS/extractors/__init__.py |
parse_metadata |
56 |
0 |
0 |
100% |
| nexusLIMS/extractors/__init__.py |
parse_metadata.ExtractorMethod.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/__init__.py |
parse_metadata.ExtractorMethod.__call__ |
0 |
0 |
1 |
100% |
| nexusLIMS/extractors/__init__.py |
create_preview |
61 |
0 |
0 |
100% |
| nexusLIMS/extractors/__init__.py |
flatten_dict |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/__init__.py |
_CustomEncoder.default |
0 |
0 |
19 |
100% |
| nexusLIMS/extractors/__init__.py |
(no function) |
38 |
0 |
9 |
100% |
| nexusLIMS/extractors/base.py |
BaseExtractor.supports |
0 |
0 |
2 |
100% |
| nexusLIMS/extractors/base.py |
BaseExtractor.extract |
0 |
0 |
2 |
100% |
| nexusLIMS/extractors/base.py |
PreviewGenerator.supports |
0 |
0 |
1 |
100% |
| nexusLIMS/extractors/base.py |
PreviewGenerator.generate |
0 |
0 |
2 |
100% |
| nexusLIMS/extractors/base.py |
(no function) |
37 |
0 |
6 |
100% |
| nexusLIMS/extractors/plugins/__init__.py |
(no function) |
1 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/basic_metadata.py |
BasicFileInfoExtractor.supports |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/basic_metadata.py |
BasicFileInfoExtractor.extract |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/basic_metadata.py |
get_basic_metadata |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/basic_metadata.py |
(no function) |
14 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
DM3Extractor.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
DM3Extractor.extract |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
get_dm3_metadata |
50 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
_apply_profile_to_metadata |
24 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
get_pre_path |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
_migrate_to_schema_compliant_metadata |
49 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
parse_dm3_microscope_info |
49 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
parse_dm3_eels_info |
21 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
parse_dm3_eds_info |
23 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
parse_dm3_spectrum_image_info |
40 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
_parse_stage_position |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
_parse_apertures |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
_parse_apertures._read_aperture |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
process_tecnai_microscope_info |
35 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/digital_micrograph.py |
(no function) |
37 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
SpcExtractor.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
SpcExtractor.extract |
20 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
SpcExtractor._migrate_to_schema_compliant_metadata |
16 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
MsaExtractor.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
MsaExtractor.extract |
18 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
MsaExtractor._migrate_to_schema_compliant_metadata |
16 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
get_spc_metadata |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
get_msa_metadata |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/edax.py |
(no function) |
26 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
SerEmiExtractor.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
SerEmiExtractor.extract |
61 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
SerEmiExtractor._migrate_to_schema_compliant_metadata |
34 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
_handle_ser_error_metadata |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
_load_ser |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
parse_basic_info |
14 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
parse_experimental_conditions |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
parse_acquire_info |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
parse_experimental_description |
19 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
get_emi_from_ser |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
fei_unit_to_pint |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
split_fei_metadata_units |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
map_keys_with_units |
16 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
parse_data_type |
18 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
_set_instrument_type |
10 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
_signal_dim_2 |
14 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
_convert_to_numeric |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
get_ser_metadata |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/fei_emi.py |
(no function) |
38 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor.supports |
10 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor.extract |
27 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._detect_variant |
17 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._extract_zeiss_metadata |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._extract_fibics_metadata |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._parse_zeiss_field |
26 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._find_fibics_section |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._parse_fibics_value |
31 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
OrionTiffExtractor._migrate_to_schema_compliant_metadata |
33 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/orion_HIM_tif.py |
(no function) |
30 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/__init__.py |
(no function) |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_full_extent |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_set_title |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_get_visible_labels |
13 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_project_image_stack |
22 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_pad_to_square |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_get_marker_color |
13 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_get_marker_props |
40 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_get_markers_list |
49 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
add_annotation_markers |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_set_extent_and_save |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_spectrum |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_linescan |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_si |
24 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_single_image |
13 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_image_stack |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_tableau |
26 |
0 |
2 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_complex_signal |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_axes_manager |
15 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_1d_signal |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
_plot_2d_signal |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
sig_to_thumbnail |
10 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
HyperSpyPreviewGenerator.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
HyperSpyPreviewGenerator.generate |
13 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/hyperspy_preview.py |
(no function) |
49 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/image_preview.py |
_pad_to_square |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/image_preview.py |
image_to_square_thumbnail |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/image_preview.py |
down_sample_image |
20 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/image_preview.py |
ImagePreviewGenerator.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/image_preview.py |
ImagePreviewGenerator.generate |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/image_preview.py |
(no function) |
18 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/text_preview.py |
_pad_to_square |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/text_preview.py |
text_to_thumbnail |
47 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/text_preview.py |
TextPreviewGenerator.supports |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/text_preview.py |
TextPreviewGenerator.generate |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/text_preview.py |
(no function) |
22 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_norm_channel |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_read_attr_scalar |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_build_ion_lookup |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_ion_label |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_depth_plot_style |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_tic_display_limits |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_add_colorbar |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_compute_tic_from_eventlist |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
TofwerkPfibPreviewGenerator.supports |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
TofwerkPfibPreviewGenerator.generate |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_generate_preview |
163 |
0 |
2 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
_generate_preview._fmt_peak_label |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/preview_generators/tofwerk_pfib_preview.py |
(no function) |
38 |
0 |
3 |
100% |
| nexusLIMS/extractors/plugins/profiles/__init__.py |
register_all_profiles |
12 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/profiles/__init__.py |
_load_profiles_from_directory |
27 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/profiles/__init__.py |
(no function) |
10 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/profiles/fei_titan_stem_643.py |
add_metadata_warnings |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/profiles/fei_titan_stem_643.py |
detect_eftem_diffraction |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/profiles/fei_titan_stem_643.py |
(no function) |
12 |
0 |
2 |
100% |
| nexusLIMS/extractors/plugins/profiles/fei_titan_tem_642.py |
parse_tecnai_metadata |
31 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/profiles/fei_titan_tem_642.py |
detect_diffraction_mode |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/profiles/fei_titan_tem_642.py |
(no function) |
14 |
0 |
2 |
100% |
| nexusLIMS/extractors/plugins/profiles/jeol_jem_642.py |
detect_diffraction_from_filename |
12 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/profiles/jeol_jem_642.py |
(no function) |
11 |
0 |
2 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor.supports |
19 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor.extract |
26 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._extract_metadata_from_tiff_tag |
32 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._extract_metadata_string |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._detect_and_process_xml_metadata |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._xml_el_to_dict |
12 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._fix_duplicate_multigis_metadata_tags |
15 |
0 |
1 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_metadata_string |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._build_field_definitions |
15 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._process_standard_fields |
12 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._set_field_value |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._set_numeric_field_value |
10 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_special_cases |
16 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_scan_rotation |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_tilt_correction |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_beam_control_flags |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_drift_correction |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_frame_integration |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_resolution |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_operator |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_chamber_pressure |
12 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_software_version |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_column_type |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_scan_settings |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._parse_nx_meta |
8 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
QuantaTiffExtractor._migrate_to_schema_compliant_metadata |
31 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
get_quanta_metadata |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/quanta_tif.py |
(no function) |
56 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor.supports |
19 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor.extract |
31 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._find_hdr_file |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._is_tescan_hdr |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._extract_embedded_hdr |
13 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._tag_to_bytes |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._extract_metadata_string |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._clean_metadata_string |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._add_section_headers_if_needed |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._find_sem_section_start |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._parse_hdr_string |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._read_hdr_metadata |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._extract_from_tiff_tags |
29 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._get_field_definitions |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._parse_nx_meta |
35 |
0 |
2 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
TescanTiffExtractor._migrate_to_schema_compliant_metadata |
27 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tescan_tif.py |
(no function) |
38 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
TofwerkPfibExtractor.supports |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
TofwerkPfibExtractor.extract |
17 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
_read_attr_scalar |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
_parse_creation_time |
13 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
_extract_fib_params |
19 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
_extract_spatial_dims |
22 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
_extract_spectral_params |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
_extract_acquisition_params |
12 |
0 |
0 |
100% |
| nexusLIMS/extractors/plugins/tofwerk_pfib.py |
(no function) |
23 |
0 |
2 |
100% |
| nexusLIMS/extractors/profiles.py |
InstrumentProfileRegistry.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/profiles.py |
InstrumentProfileRegistry.register |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/profiles.py |
InstrumentProfileRegistry.get_profile |
4 |
0 |
1 |
100% |
| nexusLIMS/extractors/profiles.py |
InstrumentProfileRegistry.get_all_profiles |
1 |
0 |
1 |
100% |
| nexusLIMS/extractors/profiles.py |
InstrumentProfileRegistry.clear |
2 |
0 |
0 |
100% |
| nexusLIMS/extractors/profiles.py |
get_profile_registry |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/profiles.py |
(no function) |
13 |
0 |
4 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.__init__ |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.extractors |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.extractor_names |
9 |
0 |
1 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.all_extractors |
15 |
0 |
1 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.discover_plugins |
33 |
0 |
2 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._register_instrument_profiles |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._is_extractor |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._is_preview_generator |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.register_extractor |
13 |
0 |
1 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._get_supported_extensions |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._get_instance |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.get_extractor |
22 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._get_fallback_extractor |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.get_extractors_for_extension |
6 |
0 |
1 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.get_supported_extensions |
12 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.clear |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.register_preview_generator |
7 |
0 |
1 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._get_supported_extensions_for_generator |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry._get_preview_instance |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
ExtractorRegistry.get_preview_generator |
14 |
0 |
1 |
100% |
| nexusLIMS/extractors/registry.py |
get_registry |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/registry.py |
(no function) |
38 |
0 |
3 |
100% |
| nexusLIMS/extractors/utils.py |
_coerce_to_list |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_get_mtime_iso |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_instr_name_and_time |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_acquisition_device_name |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_exposure_time |
7 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_gms_version |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_camera_binning |
4 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_image_processing |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_eels_meta |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_eels_spectrometer_meta |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_eels_processing |
24 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_process_thickness_metadata |
11 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_eds_meta |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_set_si_meta |
9 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_try_decimal |
6 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_parse_filter_settings |
27 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_zero_data_in_dm3 |
19 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
_find_val |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/utils.py |
add_to_extensions |
3 |
0 |
1 |
100% |
| nexusLIMS/extractors/utils.py |
(no function) |
33 |
0 |
0 |
100% |
| nexusLIMS/extractors/xml_serialization.py |
serialize_quantity_to_xml |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/xml_serialization.py |
get_xml_field_name |
3 |
0 |
0 |
100% |
| nexusLIMS/extractors/xml_serialization.py |
prepare_metadata_for_xml |
25 |
0 |
1 |
100% |
| nexusLIMS/extractors/xml_serialization.py |
get_qudt_uri |
5 |
0 |
0 |
100% |
| nexusLIMS/extractors/xml_serialization.py |
get_emg_id |
1 |
0 |
0 |
100% |
| nexusLIMS/extractors/xml_serialization.py |
(no function) |
12 |
0 |
0 |
100% |
| nexusLIMS/harvesters/__init__.py |
get_ca_bundle_path |
1 |
0 |
0 |
100% |
| nexusLIMS/harvesters/__init__.py |
get_ca_bundle_content |
3 |
0 |
5 |
100% |
| nexusLIMS/harvesters/__init__.py |
(no function) |
7 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/__init__.py |
create_res_event_from_usage_event |
16 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/__init__.py |
res_event_from_session |
38 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/__init__.py |
(no function) |
12 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.__init__ |
5 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.__repr__ |
1 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.__eq__ |
3 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.__hash__ |
1 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.strftime |
7 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.strptime |
19 |
0 |
1 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_tools |
15 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_users |
15 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_users_by_username |
11 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_projects |
17 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_reservations |
16 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector._parse_reservation |
21 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_usage_events |
25 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector._parse_dt_range |
7 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector._parse_event |
17 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.write_usage_event_to_session_log |
14 |
0 |
3 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_session_from_usage_event |
8 |
0 |
3 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector.get_known_tool_ids |
8 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector._get_users_helper |
5 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector._build_url_with_params |
14 |
0 |
1 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
NemoConnector._api_caller |
6 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/connector.py |
(no function) |
37 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/exceptions.py |
(no function) |
2 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
get_harvesters_enabled |
1 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
add_all_usage_events_to_db |
4 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
get_usage_events_as_sessions |
8 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
get_connector_for_session |
6 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
get_connector_by_base_url |
5 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
process_res_question_samples |
19 |
0 |
5 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
_get_res_question_value |
5 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
has_valid_question_data |
7 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
id_from_url |
4 |
0 |
0 |
100% |
| nexusLIMS/harvesters/nemo/utils.py |
(no function) |
18 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent.__post_init__ |
9 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent._check_arg_lists |
6 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent.__repr__ |
3 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent.as_xml |
13 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent._add_summary_node |
28 |
0 |
2 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent._add_sample_nodes |
16 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
ReservationEvent._add_project_nodes |
19 |
0 |
0 |
100% |
| nexusLIMS/harvesters/reservation_event.py |
(no function) |
36 |
0 |
0 |
100% |
| nexusLIMS/instruments.py |
_ensure_instrument_db_loaded |
3 |
0 |
0 |
100% |
| nexusLIMS/instruments.py |
_get_instrument_db |
14 |
0 |
0 |
100% |
| nexusLIMS/instruments.py |
get_instr_from_filepath |
5 |
0 |
0 |
100% |
| nexusLIMS/instruments.py |
get_instr_from_calendar_name |
5 |
0 |
0 |
100% |
| nexusLIMS/instruments.py |
get_instr_from_api_url |
5 |
0 |
0 |
100% |
| nexusLIMS/instruments.py |
(no function) |
18 |
0 |
0 |
100% |
| nexusLIMS/schemas/__init__.py |
(no function) |
5 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
cluster_filelist_mtimes |
31 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
_escape |
3 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
_add_dataset_element |
35 |
0 |
3 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.__post_init__ |
6 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.__repr__ |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.__str__ |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.add_file |
31 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.store_unique_params |
2 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.store_setup_params |
24 |
0 |
2 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.store_unique_metadata |
11 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
AcquisitionActivity.as_xml |
34 |
0 |
0 |
100% |
| nexusLIMS/schemas/activity.py |
(no function) |
44 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
_load_emg_graph |
12 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
_load_emg_terms |
25 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_emg_label |
7 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_emg_definition |
7 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_emg_id |
14 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_display_name |
4 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_description |
4 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
has_emg_id |
2 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_emg_uri |
4 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_all_mapped_fields |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_fields_with_emg_ids |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
get_all_emg_terms |
5 |
0 |
0 |
100% |
| nexusLIMS/schemas/em_glossary.py |
(no function) |
30 |
0 |
0 |
100% |
| nexusLIMS/schemas/metadata.py |
emg_field |
9 |
0 |
1 |
100% |
| nexusLIMS/schemas/metadata.py |
NexusMetadata.validate_iso_timestamp |
9 |
0 |
1 |
100% |
| nexusLIMS/schemas/metadata.py |
NexusMetadata.validate_data_type_not_empty |
4 |
0 |
0 |
100% |
| nexusLIMS/schemas/metadata.py |
SpectrumImageMetadata.validate_spectrum_image_fields |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/metadata.py |
(no function) |
121 |
0 |
12 |
100% |
| nexusLIMS/schemas/pint_types.py |
_PintQuantityPydanticAnnotation.__get_pydantic_core_schema__ |
4 |
0 |
0 |
100% |
| nexusLIMS/schemas/pint_types.py |
_PintQuantityPydanticAnnotation.__get_pydantic_core_schema__.validate_quantity |
19 |
0 |
1 |
100% |
| nexusLIMS/schemas/pint_types.py |
_PintQuantityPydanticAnnotation.__get_pydantic_core_schema__.serialize_quantity_json |
2 |
0 |
1 |
100% |
| nexusLIMS/schemas/pint_types.py |
_PintQuantityPydanticAnnotation.__get_pydantic_json_schema__ |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/pint_types.py |
(no function) |
14 |
0 |
2 |
100% |
| nexusLIMS/schemas/units.py |
_quantity_new_with_decimal_conversion |
3 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
_load_qudt_units |
19 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
_get_qudt_uri_mapping |
1 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
normalize_quantity |
10 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
parse_quantity |
15 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
quantity_to_xml_parts |
12 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
get_qudt_uri |
5 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
serialize_quantity |
3 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
deserialize_quantity |
3 |
0 |
0 |
100% |
| nexusLIMS/schemas/units.py |
(no function) |
31 |
0 |
0 |
100% |
| nexusLIMS/tui/__init__.py |
(no function) |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/__init__.py |
(no function) |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/__init__.py |
(no function) |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
ConfiguratorApp.__init__ |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
ConfiguratorApp.env_path |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
ConfiguratorApp.on_mount |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
ConfiguratorApp.get_app_name |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
ConfiguratorApp.action_help |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
ConfiguratorApp.get_keybindings |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/app.py |
(no function) |
13 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_fdesc |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_fdefault |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_edesc |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_edefault |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_md_to_rich |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_md_to_rich._replace |
5 |
0 |
1 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_fdetail |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_edetail |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
_ndetail |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
FieldDetailScreen.__init__ |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
FieldDetailScreen.compose |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
FieldDetailScreen.action_dismiss_detail |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
FieldDetailScreen._on_close_btn |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
LabArchivesGetUidDialog.__init__ |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
LabArchivesGetUidDialog.compose |
12 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
LabArchivesGetUidDialog._update_lookup_btn |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
LabArchivesGetUidDialog._on_lookup |
17 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
LabArchivesGetUidDialog._on_cancel_btn |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
LabArchivesGetUidDialog.action_cancel_dialog |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.__init__ |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._get |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._get_bool |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._parse_nemo_harvesters |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._has_elabftw |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._has_email |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._has_labarchives |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.compose |
22 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_core_paths |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_cdcs |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_file_processing |
22 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_nemo |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._nemo_group_widget |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_elabftw |
13 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_labarchives |
21 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_email |
18 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._compose_ssl |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.on_mount |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._next_nemo_index |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_save_btn |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_cancel_btn |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_nemo_add |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.on_button_pressed |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_elabftw_toggle |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_labarchives_toggle |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_labarchives_cred_changed |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._update_la_get_uid_btn |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_labarchives_get_uid |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_uid_lookup_result |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_email_toggle |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_ssl_verify_toggle |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.action_save |
15 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._has_changes |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.action_cancel |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._on_cancel_confirmed |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.action_next_tab |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.action_previous_tab |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._resolve_focused_field_detail |
13 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._resolve_input_field_detail |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._resolve_select_field_detail |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen.action_show_field_detail |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_core_paths |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_cdcs |
10 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_file_processing |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_elabftw |
15 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_labarchives |
12 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_email |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_nemo |
19 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._validate_all |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_paths_config |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_cdcs_config |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_file_config |
18 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_elabftw_config |
12 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_labarchives_config |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_email_config |
16 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_ssl_config |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_nemo_config |
15 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
ConfigScreen._build_config_dict |
10 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/screens.py |
(no function) |
124 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_nemo_address |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_optional_url |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_optional_iana_timezone |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_float_positive |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_float_nonneg |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_optional_int |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
validate_smtp_port |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/config/validators.py |
(no function) |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane.__init__ |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane.compose |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane.on_mount |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane._on_table_changed |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane._on_filter_changed |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane._on_header_selected |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane._load_table |
30 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSTableViewerPane._sort_label |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
NexusLIMSDBApp.update_ui |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/db_browser.py |
(no function) |
29 |
0 |
2 |
100% |
| nexusLIMS/tui/apps/instruments/__init__.py |
(no function) |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/app.py |
InstrumentManagerApp.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/app.py |
InstrumentManagerApp.db_path |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/app.py |
InstrumentManagerApp.on_mount |
10 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/app.py |
InstrumentManagerApp.get_app_name |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/app.py |
InstrumentManagerApp.get_keybindings |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/app.py |
(no function) |
12 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
WelcomeDialog.compose |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
WelcomeDialog.on_button_pressed |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.on_mount |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.on_welcome_complete |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.get_columns |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.get_data |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.on_row_selected |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.on_edit_complete |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.action_add |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.on_add_complete |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.action_delete |
16 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.action_delete.on_confirm |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentListScreen.delete_instrument |
10 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentAddScreen.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentAddScreen.on_mount |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentAddScreen.get_form_fields |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentAddScreen.collect_form_data |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentAddScreen.validate_form |
17 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentAddScreen.on_save |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentEditScreen.__init__ |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentEditScreen.on_mount |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentEditScreen.validate_form |
14 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
InstrumentEditScreen.on_save |
16 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/screens.py |
(no function) |
43 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
validate_instrument_pid |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
validate_api_url_unique |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
validate_location |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
validate_property_tag |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
validate_harvester |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
get_example_values |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/apps/instruments/validators.py |
(no function) |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/common/__init__.py |
(no function) |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
HelpScreen.__init__ |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
HelpScreen.compose |
16 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
HelpScreen.action_dismiss |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.on_mount |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.on_unmount |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.action_toggle_theme |
4 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.action_help |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.get_app_name |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.get_keybindings |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.show_error |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.show_success |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
BaseNexusApp.show_warning |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_app.py |
(no function) |
27 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.__init__ |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.compose |
3 |
0 |
1 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.on_mount |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.refresh_data |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen._apply_filter |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.on_header_selected |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.on_filter_changed |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_focus_filter |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_cycle_sort |
18 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.get_columns |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.get_data |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.on_row_selected_event |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.on_row_selected |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_add |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_edit |
9 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_delete |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_refresh |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_quit |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseListScreen.action_help |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.compose |
10 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.get_form_fields |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.validate_form |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.on_save |
0 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.action_save |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.on_save_button |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.on_cancel_button |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.action_cancel |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.action_help |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
BaseFormScreen.collect_form_data |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
ConfirmDialog.__init__ |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
ConfirmDialog.compose |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
ConfirmDialog.on_yes |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
ConfirmDialog.on_no |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/base_screens.py |
(no function) |
62 |
0 |
0 |
100% |
| nexusLIMS/tui/common/db_utils.py |
check_uniqueness |
9 |
0 |
1 |
100% |
| nexusLIMS/tui/common/db_utils.py |
get_session_log_count |
3 |
0 |
1 |
100% |
| nexusLIMS/tui/common/db_utils.py |
find_conflicting_instrument |
7 |
0 |
1 |
100% |
| nexusLIMS/tui/common/db_utils.py |
(no function) |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
validate_required |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
validate_max_length |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
validate_timezone |
11 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
_find_similar_timezones |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
validate_url |
16 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
validate_path |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
validate_ip_address |
13 |
0 |
0 |
100% |
| nexusLIMS/tui/common/validators.py |
(no function) |
10 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
NumpadInput.on_key |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
ValidatedInput.__init__ |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
ValidatedInput.validate_value |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
ValidatedInput._watch_value |
6 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
ValidatedInput.is_valid |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
ValidatedInput.error_message |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
AutocompleteInput.__init__ |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
AutocompleteInput.set_suggestions |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
_ListSuggester.__init__ |
2 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
_ListSuggester.get_suggestion |
7 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.Changed.__init__ |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.__init__ |
5 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.compose |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.on_input_changed |
8 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.value |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.value |
1 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.is_valid |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
FormField.error_message |
3 |
0 |
0 |
100% |
| nexusLIMS/tui/common/widgets.py |
(no function) |
39 |
0 |
0 |
100% |
| nexusLIMS/utils/__init__.py |
(no function) |
0 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
AuthenticationError.__init__ |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
get_cdcs_url |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
get_workspace_id |
6 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
get_template_id |
6 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
delete_record |
5 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
search_records |
26 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
download_record |
13 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
upload_record_content |
12 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
upload_record_files |
24 |
0 |
0 |
100% |
| nexusLIMS/utils/cdcs.py |
(no function) |
20 |
0 |
0 |
100% |
| nexusLIMS/utils/dicts.py |
get_nested_dict_value_by_path |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/dicts.py |
set_nested_dict_value |
2 |
0 |
0 |
100% |
| nexusLIMS/utils/dicts.py |
try_getting_dict_value |
7 |
0 |
1 |
100% |
| nexusLIMS/utils/dicts.py |
sort_dict |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/dicts.py |
remove_dtb_element |
2 |
0 |
0 |
100% |
| nexusLIMS/utils/dicts.py |
remove_dict_nones |
6 |
0 |
0 |
100% |
| nexusLIMS/utils/dicts.py |
(no function) |
8 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.__init__ |
3 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient._make_request |
36 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.create_experiment |
17 |
0 |
1 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.get_experiment |
14 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.list_experiments |
7 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.update_experiment |
18 |
0 |
1 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.delete_experiment |
4 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
ELabFTWClient.upload_file_to_experiment |
33 |
0 |
1 |
100% |
| nexusLIMS/utils/elabftw.py |
get_elabftw_client |
7 |
0 |
0 |
100% |
| nexusLIMS/utils/elabftw.py |
(no function) |
32 |
0 |
2 |
100% |
| nexusLIMS/utils/files.py |
find_dirs_by_mtime |
8 |
0 |
2 |
100% |
| nexusLIMS/utils/files.py |
find_files_by_mtime |
0 |
0 |
56 |
100% |
| nexusLIMS/utils/files.py |
_get_find_command |
10 |
0 |
7 |
100% |
| nexusLIMS/utils/files.py |
_get_find_command._which |
6 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
_get_find_command._which._is_exec |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
_get_find_command._is_gnu_find |
5 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
_find_symlink_dirs |
10 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
_build_find_command |
18 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
gnu_find_files_by_mtime |
17 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
_zero_bytes |
15 |
0 |
0 |
100% |
| nexusLIMS/utils/files.py |
(no function) |
17 |
0 |
1 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.__init__ |
5 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._sign |
4 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._auth_params |
2 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._throttle |
3 |
0 |
1 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._get |
20 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._get_raw |
0 |
0 |
67 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._post |
16 |
0 |
7 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._parse_response |
31 |
0 |
3 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._pretty_print_response |
0 |
0 |
9 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.get_tree_level |
8 |
0 |
2 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.get_page_entries |
0 |
0 |
58 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient._insert_node |
6 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.insert_folder |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.insert_page |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.add_entry |
6 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.add_attachment |
3 |
0 |
3 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.attach_file |
0 |
0 |
29 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.get_attachment_content |
0 |
0 |
20 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.get_user_info |
22 |
0 |
2 |
100% |
| nexusLIMS/utils/labarchives.py |
LabArchivesClient.get_user_info_by_uid |
0 |
0 |
65 |
100% |
| nexusLIMS/utils/labarchives.py |
get_labarchives_client |
13 |
0 |
0 |
100% |
| nexusLIMS/utils/labarchives.py |
(no function) |
39 |
0 |
28 |
100% |
| nexusLIMS/utils/logging.py |
setup_loggers |
4 |
0 |
0 |
100% |
| nexusLIMS/utils/logging.py |
(no function) |
2 |
0 |
0 |
100% |
| nexusLIMS/utils/network.py |
nexus_req |
33 |
0 |
1 |
100% |
| nexusLIMS/utils/network.py |
(no function) |
12 |
0 |
0 |
100% |
| nexusLIMS/utils/paths.py |
is_subpath |
3 |
0 |
1 |
100% |
| nexusLIMS/utils/paths.py |
join_instrument_filestore_path |
2 |
0 |
0 |
100% |
| nexusLIMS/utils/paths.py |
replace_instrument_data_path |
5 |
0 |
0 |
100% |
| nexusLIMS/utils/paths.py |
(no function) |
8 |
0 |
0 |
100% |
| nexusLIMS/utils/time.py |
get_timespan_overlap |
4 |
0 |
0 |
100% |
| nexusLIMS/utils/time.py |
has_delay_passed |
4 |
0 |
0 |
100% |
| nexusLIMS/utils/time.py |
current_system_tz_name |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/time.py |
current_system_tz |
1 |
0 |
0 |
100% |
| nexusLIMS/utils/time.py |
(no function) |
11 |
0 |
0 |
100% |
| nexusLIMS/version.py |
(no function) |
3 |
0 |
0 |
100% |